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cemba portal help

Status updates on the Prototype of the CEMBA web portal

from March 13, 2019 CEMBA Biweekly Meeting

Use tabular data to identify the available projections of TRIO tracing.
Use CCFv3, Marga drawings, and ARA to identify and visualize the contrast of regions of interests.
Provide entry points to molecule data (Eran’s group portal) and anatomy data (Hongwei’s group portal).

🧠 Projections table of the TRIO tracing (EnvA Rabies, AAV2retro)
🧠 ARA images
- Levels (39, 46, 51)
🧠 CCF images and Marga drawings
- Slices (3, 4, 5)
- Drawings (3A~3F, 4A~4H, 5A~5J)

💉TRIO tracers

* Env Rabies
  * EnvA G-deleted rabies RVdG-4mCherry
  * AAV8-hSyn-FLEX-TVA-P2A-GFP-2A-oG
* AAV (AAV2retro)
   * AAVretro-EF1a-Cre

TRIO tracing table of projected regions.

ARA Level 39 / CEMBA CCF Slice 3 and Marga drawings (3A~3F)

ARA Level 46 / CEMBA CCF Slice 4 and Marga drawings (4A~4H)

ARA Level 51 / CEMBA CCF Slice 5 and Marga drawings (5A~5J)

X (marked as projection is present), will give an user an option to jump

Data Repository of our published cases (Dashboard page)

Gene methylation portal (Brainome portal)