CEMBA web portal help
🥅 Use Cases
- Use tabular data to identify the available projections of TRIO tracing.
- Use CCFv3, Marga drawings, and ARA to identify and visualize the contrast of regions of interests.
- Provide entry points to molecule data (Eran’s group portal) and anatomy data (Hongwei’s group portal).
- Sagittal Brain Navigator to see the scope of slices on a sagittal plane.
⚙ GUI
- 🧠 Projections table of the TRIO tracing (EnvA Rabies, AAV2retro)
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🧠 ARA images
- Levels (39, 46, 51)
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🧠 CCF images and Marga drawings
- Slices (3, 4, 5)
- Drawings (3A~3F, 4A~4H, 5A~5J)
- ARA Levels (33~39, 39~45, 45~51)
- 🧠 Sagittal Brain Navigator
* Env Rabies
* EnvA G-deleted rabies RVdG-4mCherry
* AAV8-hSyn-FLEX-TVA-P2A-GFP-2A-oG
* AAV (AAV2retro)
* AAVretro-EF1a-Cre
TRIO tracing table of projected regions.
ARA | CCF |
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ARA Level 39 / CEMBA CCF Slice 3 and Marga drawings (3A~3F)
ARA | CCF |
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ARA Level 46 / CEMBA CCF Slice 4 and Marga drawings (4A~4H)
ARA | CCF |
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ARA Level 51 / CEMBA CCF Slice 5 and Marga drawings (5A~5J)
🔗 Link
Dark grayed cell will give an user an option to jump
Data Repository of our published cases (Dashboard page)
Gene methylation portal (Brainome portal)